Date Title Item Type No Grouping

Collection

Clinical code lists for: "Metformin use and risk of cancer in patients with type 2 diabetes: A cohort study of primary care records using inverse probability weighting of marginal structural models". (2018) Farmer, Ruth; Bhaskaran, Krishnan; Eastwood, Sophie V.; Mathur, Rohini

Menstrual Hygiene and Safe Male Circumcision Promotion in Ugandan Schools (MENISCUS). (2018) Weiss, Helen

Dataset

Additional file 1: of Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data. (2018) Sobkowiak, Benjamin; Glynn, Judith R.; Houben, Rein M. G. J.; Mallard, Kim; Phelan, Jody E.; Guerra-Assunção, José Afonso; Banda, Louis; Mzembe, Themba; Viveiros, Miguel; McNerney, Ruth; Parkhill, Julian; Crampin, Amelia C.; Clark, Taane G.

Reported contacts dataset for "Structure and consistency of self-reported social contact networks in British secondary schools". (2018) Kucharski, Adam J.; Wenham, Clare; Brownlee, Polly; Racon, Lucie; Widmer, Natasha; Eames, Ken T. D.; Conlan, Andrew J. K.

HIV Combination Prevention study - Data at months 0, 9 and 15. (2018) Kuteesa, Monica O.; Weiss, Helen A.; Abaasa, Andrew; Nash, Stephen; Nsubuga, Rebecca N.; Newton, Rob; Seeley, Janet; Kamali, Anatoli description

Data for "HANDS project - Hand-hygiene of Attendants for Newborn Deliveries and Survival". (2018) Gon, Giorgia description

Clinical code list - Alcohol. (2018) Farmer, Ruth; Douglas, Ian J. description

Clinical code list - Cancer. (2018) Bhaskaran, Krishnan; Farmer, Ruth description

Clinical code list - Cardiovascular disease. (2018) Farmer, Ruth description

Clinical code list - Chronic kidney disease. (2018) Farmer, Ruth description

Clinical code list - Diabetes care related codes. (2018) Eastwood, Sophie V.; Mathur, Rohini; Farmer, Ruth description

Clinical code list - Diabetes diagnoses. (2018) Eastwood, Sophie V.; Mathur, Rohini; Farmer, Ruth description

Identification and validation of a novel panel of Plasmodium knowlesi biomarkers of serological exposure. (2018) Herman, Lou S.; Fornace, Kimberly; Phelan, Jody; Grigg, Matthew J.; Anstey, Nicholas M.; William, Timothy; Moon, Robert W.; Blackman, Michael J.; Drakeley, Chris J.; Tetteh, Kevin K. A.

Global analysis of Plasmodium falciparum histidine-rich protein-2 ( pfhrp2 ) and pfhrp3 gene deletions using whole-genome sequencing data and meta-analysis. (2018) Sepúlveda, Nuno; Phelan, Jody; Diez-Benavente, Ernest; Campino, Susana; Clark, Taane G.; Hopkins, Heidi; Sutherland, Colin; Drakeley, Chris J.; Beshir, Khalid B.

Data for: "From kitchen to classroom: Assessing the impact of cleaner burning biomass-fuelled cookstoves on primary school attendance in Karonga district, northern Malawi". (2018) Kelly, Christine; Dube, Albert; Mortimer, Kevin html

Cost-effectiveness of prenatal food and micronutrient interventions on under-five mortality and stunting: Analysis of data from the MINIMat randomized trial, Bangladesh. (2018) Svefors, Pernilla; Selling, Katarina Ekholm; Shaheen, Rubina; Khan, Ashraful Islam; Persson, Lars Åke; Lindholm, Lars

Decoding the network of Trypanosoma brucei proteins that determines sensitivity to apolipoprotein-L1. (2018) Currier, Rachel B.; Cooper, Anneli; Burrell-saward, Hollie; MacLeod, Annette; Alsford, Sam

Data for: "Menstrual health and school absenteeism among adolescent girls in Uganda (MENISCUS): feasibility study". (2018) Weiss, Helen; Nakinyingi-Miiro, Jessica; Sembajjwe, Wilber folder_zip

Data for: "Does azithromycin given to women in labour decrease ocular bacterial infection in neonates? A double-blind, randomized trial". (2017) Burr, Sarah E.; Camara, Bully; Oluwalana, Claire; Bojang, Ebrima; Bottomley, Christian; Bojang, Abdoulie; Bailey, Robin L.; D’alessandro, Umberto; Roca, Anna description

Social mixing in Fiji: Who-eats-with-whom contact patterns and the implications of age and ethnic heterogeneity for disease dynamics in the Pacific Islands. (2017) Watson, Conall H.; Coriakula, Jeremaia; Ngoc, Dung Tran Thi; Flasche, Stefan; Kucharski, Adam J.; Lau, Colleen L.; Thieu, Nga Tran Vu; le Polain de Waroux, Olivier; Rawalai, Kitione; Van, Tan Trinh; Taufa, Mere; Baker, Stephen; Nilles, Eric J.; Kama, Mike; Edmunds, W. John

Association between the 2012 Health and Social Care Act and specialist visits and hospitalisations in England: A controlled interrupted time series analysis. (2017) Lopez Bernal, James A.; Lu, Christine Y.; Gasparrini, Antonio; Cummins, Steven; Wharham, J. Frank; Soumerai, Steven B.

Model code for "An explanation for the low proportion of tuberculosis that results from transmission between household and known social contacts". (2017) Mccreesh, Nicky description

R code: why sensitive bacteria are resistant to hospital infection control. (2017) van Kleef, Esther; Luangasanatip, Nantasit; Bonten, Marc JM; Cooper, Ben S

Analysis of nuclear and organellar genomes of Plasmodium knowlesi in humans reveals ancient population structure and recent recombination among host-specific subpopulations. (2017) Diez Benavente, Ernest; Florez de Sessions, Paola; Moon, Robert W.; Holder, Anthony A.; Blackman, Michael J.; Roper, Cally; Drakeley, Christopher J.; Pain, Arnab; Sutherland, Colin J.; Hibberd, Martin L.; Campino, Susana; Clark, Taane G.

MENISCUS SMC dataset. (2017) Weiss, Helen; Nakinyingi-Miiro, Jessica; Sembajjwe, Wilber; Gibson, Lorna html

The emerging GII.P16-GII.4 Sydney 2012 norovirus lineage is circulating worldwide, arose by late-2014 and contains polymerase changes that may increase virus transmission. (2017) Ruis, Christopher; Roy, Sunando; Brown, Julianne R.; Allen, David J.; Goldstein, Richard A.; Breuer, Judith

National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Biological Data: Secure Access. (2017) Johnson, Anne; Mercer, C

National Survey of Sexual Attitudes and Lifestyles, 2010-2012: Secure Access. (2017) Johnson, Anne; Mercer, C.

Data from a study of Guinea worm infection in northern Nigeria, 1971-1974. (2017) Greenwood, Brian; Greenwood, Alice; Bradley, Andrew

Primary macrophages and J774 cells respond differently to infection with Mycobacterium tuberculosis. (2017) Andreu, Nuria; Phelan, Jody; de Sessions, Paola F; Cliff, Jackie M.; Clark, Taane; Hibberd, Martin

R and STATA code for: "Interrupted time series regression for the evaluation of public health interventions: a tutorial". (2017) Lopez-Bernal, James; Cummins, Steven; Gasparrini, Antonio

attrdl.Rd: Attributable Risk from a DLNM. (2017) Gasparrini, Antonio; Leone, Michela

R code and data for: "A penalized framework for distributed lag non-linear models". (2017) Gasparrini, Antonio; Scheipl, Fabian; Armstrong, Ben; Kenward, Mike

Ecological Study of HIV Infection and Hypertension in Sub-Saharan Africa: Is There a Double Burden of Disease? (2016) Angkurawaranon, C.; Nitsch, Dorothea; Larke, Natasha; Rehman, Andrea M.; Smeeth, Liam; Addo, Juliet

Community readiness for adolescents’ overweight and obesity prevention is low in urban South Africa: a case study. (2016) Pradeilles, Rebecca; Rousham, Emily K.; Norris, Shane A.; Kesten, Joanna M.; Griffiths, Paula L. description

Genome-scale comparison of expanded gene families in Plasmodium ovale wallikeri and Plasmodium ovale curtisi with Plasmodium malariae and with other Plasmodium species. (2016) Ansari, Hifzur Rahman; Templeton, Thomas J.; Subudhi, Amit Kumar; Ramaprasad, Abhinay; Tang, Jianxia; Lu, Feng; Naeem, Raeece; Hashish, Yasmeen; Oguike, Mary C.; Benavente, Ernest Diez; Clark, Taane G.; Sutherland, Colin J.; Barnwell, John W.; Culleton, Richard; Cao, Jun; Pain, Arnab folder_zip

The Prevalence of Scabies and Impetigo in the Solomon Islands: A Population-Based Survey. (2016) Mason, Daniel S.; Marks, Michael; Sokana, Oliver; Solomon, Anthony W.; Mabey, David C.; Romani, Lucia; Kaldor, John; Steer, Andrew C.; Engelman, Daniel grid_on

Factors Affecting Access to Healthcare: An Observational Study of Children under 5 Years of Age Presenting to a Rural Gambian Primary Healthcare Centre. (2016) Rees, Claire P.; Hawkesworth, Sophie; Moore, Sophie E.; Dondeh, Bai L.; Unger, Stefan A. description

Host Immune Responses Differ between M. africanum- and M. tuberculosis-Infected Patients following Standard Anti-tuberculosis Treatment. (2016) Tientcheu, Leopold; Haks, Mariëlle C.; Agbla, Schadrac; Sutherland, Jayne S.; Adetifa, Ifedayo; Donkor, Simon; Quinten, Edwin; Daramy, Mohammed; Antonio, Martin; Kampmann, Beate; Ottenhoff, Tom H. M.; Dockrell, Hazel; Ota, Martin O. description

Transmission Dynamics of Zika Virus in Island Populations: A Modelling Analysis of the 2013–14 French Polynesia Outbreak. (2016) Kucharski, Adam J.; Funk, Sebastian; Eggo, Rosalind M.; Mallet, Henri-Pierre; Edmunds, W. John; Nilles, Eric J. description

High Throughput Screening Identifies Novel Lead Compounds with Activity against Larval, Juvenile and Adult Schistosoma mansoni. (2016) Mansour, Nuha R.; Paveley, Ross; Gardner, J. Mark F.; Bell, Andrew S.; Parkinson, Tanya; Bickle, Quentin grid_on

Multiple imputation methods for bivariate outcomes in cluster randomised trials: Supporting Information. (2016) Diaz-ordaz, Karla; Kenward, Mike; Gomes, Manuel; Grieve, Richard description

Validation of the Recording of Acute Exacerbations of COPD in UK Primary Care Electronic Healthcare Records. (2016) Chotirmall, Sanjay Haresh; Rothnie, Kieran; Müllerová, Hana; Hurst, John R.; Smeeth, Liam; Davis, Kourtney; Thomas, Sara L; Quint, Jennifer description

Stunted at 10 Years. Linear Growth Trajectories and Stunting from Birth to Pre-Adolescence in a Rural Bangladeshi Cohort. (2016) Carpenter, David O.; Svefors, Pernilla; Rahman, Anisur; Ekström, Eva-Charlotte; Khan, Ashraful Islam; Lindström, Emma; Persson, Lars Åke; Ekholm Selling, Katarina

Dihydrofolate-Reductase Mutations in Plasmodium knowlesi Appear Unrelated to Selective Drug Pressure from Putative Human-To-Human Transmission in Sabah, Malaysia. (2016) Tsuboi, Takafumi; Grigg, Matthew; Barber, Bridget E.; Marfurt, Jutta; Imwong, Mallika; William, Timothy; Bird, Elspeth; Piera, Kim A.; Aziz, Ammar; Boonyuen, Usa; Drakeley, Chris; Cox, Jonathan; White, Nicholas J.; Cheng, Qin; Yeo, Tsin W.; Auburn, Sarah; Anstey, Nicholas M. description

Low Ambient Temperature and Intracerebral Hemorrhage: The INTERACT2 Study. (2016) Wang, Xiaoying; Zheng, Danni; Arima, Hisatomi; Sato, Shoichiro; Gasparrini, Antonio; Heeley, Emma; Delcourt, Candice; Lo, Serigne; Huang, Yining; Wang, Jiguang; Stapf, Christian; Robinson, Thompson; Lavados, Pablo; Chalmers, John; Anderson, Craig S.

Data for: "Recombination in pe/ppe genes contributes to genetic variation in Mycobacterium tuberculosis lineages". (2016) Phelan, Jody E.; Coll, Francesc; Bergval, Indra; Anthony, Richard M.; Warren, Rob; Sampson, Samantha L.; Gey van Pittius, Nicolaas C.; Glynn, Judith R.; Crampin, Amelia C.; Alves, Adriana; Bessa, Theolis Barbosa; Campino, Susana; Dheda, Keertan; Grandjean, Louis; Hasan, Rumina; Hasan, Zahra; Miranda, Anabela; Moore, David; Panaiotov, Stefan; Perdigao, Joao; Portugal, Isabel; Sheen, Patricia; de Oliveira Sousa, Erivelton; Streicher, Elizabeth M.; van Helden, Paul D.; Viveiros, Miguel; Hibberd, Martin L.; Pain, Arnab; Mcnerney, Ruth; Clark, Taane G.

Evidence for Community Transmission of Community-Associated but Not Health-Care-Associated Methicillin-Resistant Staphylococcus Aureus Strains Linked to Social and Material Deprivation: Spatial Analysis of Cross-sectional Data. (2016) Kretzschmar, Mirjam E. E.; Tosas Auguet, Olga; Betley, Jason R.; Stabler, Richard; Patel, Amita; Ioannou, Avgousta; Marbach, Helene; Hearn, Pasco; Aryee, Anna; Goldenberg, Simon D.; Otter, Jonathan A.; Desai, Nergish; Karadag, Tacim; Grundy, Chris; Gaunt, Michael; Cooper, Ben S.; Edgeworth, Jonathan D.; Kypraios, Theodore description

The Incidence of Human Papillomavirus in Tanzanian Adolescent Girls Before Reported Sexual Debut. (2015) Houlihan, Catherine; Baisley, Kathy; Bravo, Ignacio G.; Kapiga, Saidi; de Sanjosé, Silvia; Changalucha, John; Ross, David; Hayes, Richard; Watson-jones, Deborah

Data for: "Immune activation in the female genital tract: Expression profiles of soluble proteins in women at high risk for HIV infection". (2015) Francis, Suzanna C; Hou, Yanwen; Baisley, Kathy; Van de wijgert, Janneke; Watson-Jones, Deborah; Ao, Trong T; Herrera, Carolina; Maganja, Kaballa; Andreasen, Aura; Coulton, Gary R; Hayes, Richard J; Shattock, Robin J

Data for: "Anemia, Blood Transfusion Requirements and Mortality Risk in Human Immunodeficiency Virus-Infected Adults Requiring Acute Medical Admission to Hospital in South Africa". (2015) Kerkhoff, Andrew D; Lawn, Stephen; Schutz, Charlotte; Burton, Rosie; Boulle, Andrew; Cobelens, Frank J; Meintjes, Graeme

Chronic Diseases in North-West Tanzania and Southern Uganda. Public Perceptions of Terminologies, Aetiologies, Symptoms and Preferred Management. (2015) Nnko, Soori; Bukenya, Dominic; Kavishe, Bazil Balthazar; Biraro, Samuel; Peck, Robert; Kapiga, Saidi; Grosskurth, Heiner; Seeley, Janet

Whole genome sequences for M.tuberculosis isolates from the TDR strain bank. (2015) Phelan, Jody; Coll, Francesc; Mcnerney, Ruth; Ascher, David B.; Pires, Douglas E. V.; Furnham, Nick; Coeck, Nele; Hill-Cawthorne, Grant A.; Nair, Mridul B.; Mallard, Kim; Ramsay, Andrew; Campino, Susana; Hibberd, Martin; Pain, Arnab; Rigouts, Leen; Clark, Taane description

Modulation of the Surface Proteome through Multiple Ubiquitylation Pathways in African Trypanosomes: Supporting Information. (2015) Zoltner, Martin; Leung, Ka Fai; Alsford, Sam; Horn, David; Field, Mark C

National Survey of Sexual Attitudes and Lifestyles, 2010-2012. (2015) Johnson, Anne

Evidence for negative selection of gene variants that increase dependence on dietary choline in a Gambian cohort: Supplemental Data. (2015) Silver, Matt; Corbin, K. D.; Hellenthal, G.; da Costa, K.-A.; Dominguez-salas, Paula; Moore, Sophie; Owen, J.; Prentice, Andrew; Hennig, Branwen; Zeisel, S. H. grid_on

Cycle training for children: Which schools offer it and who takes part? (2015) Goodman, Anna; van Sluijs, Esther M.F.; Ogilvie, David

Glitazone Treatment and Incidence of Parkinson’s Disease among People with Diabetes: A Retrospective Cohort Study. (2015) Brauer, Ruth; Bhaskaran, Krishnan; Chaturvedi, Nishi; Dexter, David T; Smeeth, Liam; Douglas, Ian

School's Out: Seasonal Variation in the Movement Patterns of School Children. (2015) Kucharski, Adam; Conlan, Andrew J. K.; Eames, Ken grid_on

Screening and treatment of malaria in pregnancy in West Africa. (2015) Cairns, Matthew; Woukeu, Arouna; Tagbor, Harry folder_zip

PhyloTrack. (2015) Benavente, Ernest; Coll, Francesc; Furnham, Nick; Mcnerney, Ruth; Glynn, Judith; Campino, Susana; Pain, Arnab; Mohareb, Fady R; Clark, Taane

Genome-wide analysis of selection on the malaria parasite Plasmodium falciparum in West African populations of differing infection endemicity: Supplementary data. (2015) Mobegi, Victor; Duffy, Craig; Amambua-Ngwa, Alfred; Loua, Kovana M; Laman, Eugene; Nwakanma, Davis C; MacInnis, Bronwyn; Aspeling-jones, Harvey; Murray, Lee; Clark, Taane; Kwiatkowski, Dominic P; Conway, David grid_on

A Cross-Sectional Study of ‘Yaws’ in Districts of Ghana Which Have Previously Undertaken Azithromycin Mass Drug Administration for Trachoma Control. (2015) Ghinai, Rosanna; El-Duah, Philip; Chi, Kai-Hua; Pillay, Allan; Solomon, Anthony W.; Bailey, Robin; Agana, Nsiire; Mabey, David; Chen, Cheng-Yen; Adu-Sarkodie, Yaw; Marks, Michael description

Data for: "The draft genome of Mycobacterium aurum, a potential model organism for investigating drugs against Mycobacterium tuberculosis and Mycobacterium leprae". (2015) Phelan, Jody; Maitra, Arundhati; Mcnerney, Ruth; Nair, Mridul; Gupta, Antima; Coll, Francesc; Pain, Arnab; Bhakta, Sanjib; Clark, Taane G.

Staphylococcus Aureus BSAC study data. (2015) Reuter, Sandra; Török, M. Estée; Holden, Matthew T.G.; Reynolds, Rosy; Raven, Kathy E.; Blane, Beth; Donker, Tjibbe; Bentley, Stephen D.; Aanensen, David M.; Grundmann, Hajo; Feil, Edward J.; Spratt, Brian G.; Parkhill, Julian; Peacock, Sharon

Generation of Antigenic Diversity in Plasmodium falciparum by Structured Rearrangement of Var Genes During Mitosis. (2014) Claessens, Antoine; Hamilton, William L; Kekre, Mihir; Otto, Thomas D; Faizullabhoy, Adnan; Rayner, Julian C; Kwiatkowski, Dominic

Potential for large outbreaks of Ebola virus disease: Supplementary Data. (2014) Camacho, Anton; Kucharski, Adam; Funk, Sebastian; Breman, J; Piot, Peter; Edmunds, John

Social conditions and disability related to the mortality of older people in rural South Africa: Supplementary Data. (2014) Gómez-Olivé, F Xavier; Thorogood, Margaret; Bocquier, Philippe; Mee, Paul; Kahn, Kathleen; Berkman, Lisa; Tollman, Stephen

Respondent-Driven Sampling and Total Population Data from a Rural Ugandan Cohort, 2010: Special Licence Access. (2014) White, Richard

Data from: Distinguishing between reservoir exposure and human-to-human transmission for emerging pathogens using case onset data. (2014) Kucharski, Adam; Mills, Harriet; Pinsent, Amy; Fraser, Christophe; Kerkhove, Maria Van; Riley, Steven description

Phase Ia clinical evaluation of the safety and immunogenicity of the Plasmodium falciparum blood-stage antigen AMA1 in ChAd63 and MVA vaccine vectors. (2012) Sheehy, Susanne H; Duncan, Christopher J. A.; Elias, Sean C.; Biswas, Sumi; Collins, Katharine A.; O'hara, Geraldine; Halstead, Fenella D.; Ewer, Katie J.; Mahungu, Tabitha; Spencer, Alexandra J.; Miura, Kazutoyo; Poulton, Ian D.; Dicks, Matthew D. J.; Edwards, Nick J.; Berrie, Eleanor; Moyle, Sarah; Colloca, Stefano; Cortese, Riccardo; Gantlett, Katherine; Long, Carole A.; Lawrie, Alison M.; Gilbert, Sarah C.; Doherty, Tom; Nicosia, Alfredo; Hill, Adrian V. S.; Draper, Simon J. folder_zip

An Economic Evaluation of Home Management of Malaria in Uganda: An Interactive Markov Model. (2010) Lubell, Yoel; Mills, Anne; Whitty, Christopher; Staedke, Sarah description

Quality of Life among People Aged 75 and over in Great Britain, 1994-1998. (2006) Breeze, Elizabeth; Wilkinson, Paul; Fletcher, Astrid; Bulpitt, C; Jones, D; Tulloch, A

CRASH - Corticosteroid Randomisation after Significant Head Injury. (2005) CRASH Trial Collaborators description